Integrated Publishing Toolkit(IPT)

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Soudan Mine Metagenome

Latest version published on Apr 14, 2016
This resource has not been registered with GBIF

Contrasting biological, chemical and hydrogeological analyses highlights the fundamental processes that shape different environments. Generating and interpreting the biological sequence data was a costly and time-consuming process in defining an environment. Here we have used pyrosequencing, a rapid and relatively inexpensive sequencing technology, to generate environmental genome sequences from two sites in the Soudan Mine, Minnesota, USA. These sites were adjacent to each other, but differed significantly in chemistry and hydrogeology.

The dataset corresponds to the following project on MG-RAST, and comprises all its (2) metagenomes: http://metagenomics.anl.gov/linkin.cgi?project=55

Data Records

The data in this sampling event resource has been published as a Darwin Core Archive (DwC-A), which is a standardized format for sharing biodiversity data as a set of one or more data tables. The core data table contains 1 records.

This IPT archives the data and thus serves as the data repository. The data and resource metadata are available for download in the downloads section. The versions table lists other versions of the resource that have been made publicly available and allows tracking changes made to the resource over time.

Downloads

Download the latest version of this resource data as a Darwin Core Archive (DwC-A) or the resource metadata as EML or RTF:

Data as a DwC-A file download 1 records in English (3 KB) - Update frequency: as needed
Metadata as an EML file download in English (4 KB)
Metadata as an RTF file download in English (6 KB)

Versions

The table below shows only published versions of the resource that are publicly accessible.

How to cite

Researchers should cite this work as follows:

Edwards R (2016): Soudan Mine Metagenome. v1.3. No organisation. Dataset/Samplingevent. http://eubon-ipt.gbif.org/resource?r=soudan&v=1.3

Rights

Researchers should respect the following rights statement:

This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY-NC) 4.0 License.

GBIF Registration

This resource has not been registered with GBIF

Keywords

Samplingevent

Contacts

Who created the resource:

Robert Edwards

Who can answer questions about the resource:

Kyle Braak

Who filled in the metadata:

Kyle Braak

Who else was associated with the resource:

User
Kyle Braak

Geographic Coverage

Soudan Underground Mine, on the south shore of Lake Vermilion, MN

Bounding Coordinates South West [47.819, -92.243], North East [47.819, -92.243]

Temporal Coverage

Start Date 2005-03-31

Additional Metadata

Alternative Identifiers http://eubon-ipt.gbif.org/resource?r=soudan